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  5. SymbC1.scaffold291.9

SymbC1.scaffold291.9 (291.9)


Aliases : 291.9

Description : Cyclic nucleotide-binding domain [Interproscan].


Gene families : OG_01_0000277 (OrthoFinder) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold291.9
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Cz10g29170.t1 No alias Cyclic nucleotide-binding domain; Protein kinase domain... 0.01 OrthoFinder
EOD31039 No alias Cyclic nucleotide-binding domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold7892.1 7892.1 Cyclic nucleotide-binding domain [Interproscan]. 0.04 OrthoFinder
TP04G01700.1 No alias Cyclic nucleotide-binding domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_59218 59218 Cyclic nucleotide-binding domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_89540 89540 Protein kinase domain; Cyclic nucleotide-binding domain... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 135 219
IPR000595 cNMP-bd_dom 330 369
No external refs found!