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  5. SymbC1.scaffold2858.3

SymbC1.scaffold2858.3 (2858.3)


Aliases : 2858.3

Description : PP2A regulatory subunit B'', EF-hand domain; EF-hand domain [Interproscan].


Gene families : OG_01_0000704 (OrthoFinder) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2858.3
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Sro1724_g293670.3 No alias Zinc/iron permease [Interproscan]. 0.01 OrthoFinder
Vocar.0001s0160.1 32884467 Zinc/iron permease [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000200.1_cds_GFH08990.1_3467 HaLaN_04046, GFH08990 EF-hand domain; PP2A regulatory subunit B'', EF-hand... 0.02 OrthoFinder
lcl|BLLF01004218.1_cds_GFH29172.1_23649 HaLaN_27792, GFH29172 PP2A regulatory subunit B'', EF-hand domain; EF-hand... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 355 455
IPR041534 EF-hand_13 253 339
No external refs found!