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  5. SymbC1.scaffold2852.2

SymbC1.scaffold2852.2 (2852.2)


Aliases : 2852.2

Description : Cyclic nucleotide-binding domain [Interproscan].


Gene families : OG_01_0000277 (OrthoFinder) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2852.2
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Cre16.g663200 30777827, FAP295 Enzyme classification.EC_2 transferases.EC_2.7... 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61097.1_659 PRW61097 Cyclic nucleotide dependent kinase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 35 122
No external refs found!