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  5. SymbC1.scaffold282.25

SymbC1.scaffold282.25 (282.25)


Aliases : 282.25

Description : Hedgehog protein, Hint domain [Interproscan].


Gene families : OG_01_0003906 (OrthoFinder) Phylogenetic Tree(s): OG0003906_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold282.25
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_1128 1128 Hedgehog protein, Hint domain [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496835.1_564 KAA8496835 Warthog protein 4 0.03 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494752.1_3282 KAA8494752 Indian hedgehog protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0016540 protein autoprocessing IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR001767 Hedgehog_Hint 367 522
No external refs found!