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  5. SymbC1.scaffold2811.2

SymbC1.scaffold2811.2 (2811.2)


Aliases : 2811.2

Description : AMP-dependent synthetase/ligase [Interproscan].


Gene families : OG_01_0000621 (OrthoFinder) Phylogenetic Tree(s): OG0000621_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2811.2
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Sro525_g160080.1 Contig3147.g24956 Putative fatty-acid--CoA ligase FadD21 0.01 OrthoFinder
Sro742_g195930.1 Contig1214.g11409 D-alanine--D-alanyl carrier protein ligase 0.01 OrthoFinder
SymbC1.scaffold18.210 18.210 AMP-dependent synthetase/ligase; Phosphopantetheine... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 121 556
No external refs found!