SymbC1.scaffold2798.1 (2798.1)

Aliases : 2798.1

Description : DEAD/DEAH box helicase domain; Helicase, C-terminal [Interproscan].

Gene families : OG_01_0003167 (OrthoFinder) Phylogenetic Tree(s): OG0003167_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold2798.1
Cluster	HCCA: Cluster_128

Target	Alias	Description	ECC score	Gene Family Method	Actions
TP11G00380.1	No alias	Helicase, C-terminal; DEAD/DEAH box helicase domain...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Enrichment
MF	GO:0004601	peroxidase activity	IEP	Enrichment
BP	GO:0006979	response to oxidative stress	IEP	Enrichment
CC	GO:0009521	photosystem	IEP	Enrichment
CC	GO:0009523	photosystem II	IEP	Enrichment
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Enrichment
BP	GO:0010109	regulation of photosynthesis	IEP	Enrichment
BP	GO:0015979	photosynthesis	IEP	Enrichment
MF	GO:0016832	aldehyde-lyase activity	IEP	Enrichment
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Enrichment
CC	GO:0019898	extrinsic component of membrane	IEP	Enrichment
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	Enrichment
BP	GO:0042549	photosystem II stabilization	IEP	Enrichment
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	Enrichment
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Enrichment
CC	GO:1990204	oxidoreductase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	55	125
IPR001650	Helicase_C	162	284

External Links

No external refs found!