SymbC1.scaffold2748.1 (2748.1)

Aliases : 2748.1

Description : Dynein heavy chain region D6 P-loop domain; Dynein heavy chain, coiled coil stalk; Dynein heavy chain, ATP-binding dynein motor region; Dynein heavy chain, AAA 5 extension domain; Dynein heavy chain, domain-2; P-loop containing dynein motor region; Dynein heavy chain 3, AAA+ lid domain; Dynein heavy chain, hydrolytic ATP-binding dynein motor region; Dynein heavy chain AAA lid domain; Dynein heavy chain, AAA module D4 [Interproscan].

Gene families : OG_01_0000011 (OrthoFinder) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold2748.1
Cluster	HCCA: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000042.98	tig00000042_g15496.t1	Cytoskeleton.microtubular network.Dynein...	0.01	OrthoFinder
Dusal.0002s00068.1	33187943	Hypothetical protein	0.01	OrthoFinder
Dusal.0252s00010.1	33187315	P-loop containing dynein motor region; Dynein heavy...	0.02	OrthoFinder
Dusal.0252s00012.1	33187305	Dynein heavy chain, domain-2 [Interproscan].	0.01	OrthoFinder
Dusal.0266s00011.1	33203126	Dynein heavy chain 3, AAA+ lid domain; Dynein heavy...	0.01	OrthoFinder
Dusal.0588s00008.1	33195778	Dynein heavy chain 3, AAA+ lid domain; Dynein heavy...	0.02	OrthoFinder
Dusal.0627s00001.1	33192876	Dynein heavy chain region D6 P-loop domain; Dynein heavy...	0.01	OrthoFinder
EOD13626	No alias	Dynein heavy chain AAA lid domain; Dynein heavy chain,...	0.01	OrthoFinder
EOD15344	No alias	Dynein heavy chain, AAA 5 extension domain; Dynein heavy...	0.01	OrthoFinder
EOD18539	No alias	Dynein heavy chain AAA lid domain; Dynein heavy chain,...	0.01	OrthoFinder
EOD19332	No alias	Dynein heavy chain AAA lid domain; Dynein heavy chain,...	0.01	OrthoFinder
OT_06G04500.1	No alias	Dynein heavy chain, domain-1; Dynein heavy chain region...	0.02	OrthoFinder
OT_14G00090.1	No alias	Dynein heavy chain, domain-1; Dynein heavy chain region...	0.01	OrthoFinder
Vocar.0031s0108.1	32890040	Dynein heavy chain, coiled coil stalk; Dynein heavy...	0.01	OrthoFinder
XM_002505534.1	MICPUN_104997, 104997	Dynein-1-beta heavy chain, flagellar inner arm I1 complex (DHC10)	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	motor activity	None	Extended
MF	GO:0003777	microtubule motor activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005875	microtubule associated complex	None	Extended
BP	GO:0006928	movement of cell or subcellular component	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007018	microtubule-based movement	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
CC	GO:0030286	dynein complex	IEA	Interproscan
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Enrichment
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Enrichment
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Enrichment
MF	GO:0004112	cyclic-nucleotide phosphodiesterase activity	IEP	Enrichment
MF	GO:0004114	3',5'-cyclic-nucleotide phosphodiesterase activity	IEP	Enrichment
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Enrichment
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	Enrichment
BP	GO:0006397	mRNA processing	IEP	Enrichment
BP	GO:0008380	RNA splicing	IEP	Enrichment
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	Enrichment
MF	GO:0015078	proton transmembrane transporter activity	IEP	Enrichment
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Enrichment
MF	GO:0017069	snRNA binding	IEP	Enrichment
MF	GO:0017070	U6 snRNA binding	IEP	Enrichment
MF	GO:0022804	active transmembrane transporter activity	IEP	Enrichment
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0030623	U5 snRNA binding	IEP	Enrichment
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR024743	Dynein_HC_stalk	2111	2454
IPR004273	Dynein_heavy_D6_P-loop	2957	3077
IPR041589	DNAH3_AAA_lid_1	1695	1782
IPR035699	AAA_6	810	1143
IPR041658	AAA_lid_11	3078	3241
IPR024317	Dynein_heavy_chain_D4_dom	1837	2095
IPR035706	AAA_9	2484	2701
IPR013602	Dynein_heavy_linker	251	668
IPR041466	Dynein_AAA5_ext	1311	1473

External Links

No external refs found!

SymbC1.scaffold2748.1 (2748.1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation