SymbC1.scaffold274.5 (274.5)


Aliases : 274.5

Description : EF-hand domain [Interproscan].


Gene families : OG_01_0007271 (OrthoFinder) Phylogenetic Tree(s): OG0007271_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold274.5
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold5198.1 5198.1 EF-hand domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004334 fumarylacetoacetase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0015099 nickel cation transmembrane transporter activity IEP Enrichment
BP GO:0015675 nickel cation transport IEP Enrichment
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Enrichment
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0030248 cellulose binding IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0035444 nickel cation transmembrane transport IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 343 362
No external refs found!