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  5. SymbC1.scaffold2727.2

SymbC1.scaffold2727.2 (2727.2)


Aliases : 2727.2

Description : Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain [Interproscan].


Gene families : OG_01_0001118 (OrthoFinder) Phylogenetic Tree(s): OG0001118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2727.2
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_54315 54315 Transketolase, C-terminal domain; Transketolase-like,... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR005475 Transketolase-like_Pyr-bd 66 213
IPR005474 Transketolase_N 8 65
No external refs found!