SymbC1.scaffold2715.7 (2715.7)


Aliases : 2715.7

Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0001414 (OrthoFinder) Phylogenetic Tree(s): OG0001414_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2715.7
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1125.2 1125.2 Hypothetical protein 0.06 OrthoFinder
SymbC1.scaffold2594.2 2594.2 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold4613.1 4613.1 Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
SymbC1.scaffold534.4 534.4 Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
SymbC1.scaffold5437.3 5437.3 Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
SymbC1.scaffold5544.1 5544.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold6715.1 6715.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold7191.4 7191.4 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold7480.1 7480.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold9518.1 9518.1 Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006026 aminoglycan catabolic process IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008488 gamma-glutamyl carboxylase activity IEP Enrichment
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0017187 peptidyl-glutamic acid carboxylation IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018200 peptidyl-glutamic acid modification IEP Enrichment
BP GO:0018214 protein carboxylation IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 1747 1880
No external refs found!