1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold27.16

SymbC1.scaffold27.16 (27.16)


Aliases : 27.16

Description : KOW; Ribosomal protein L26/L24, eukaryotic/archaeal [Interproscan].


Gene families : OG_01_0003267 (OrthoFinder) Phylogenetic Tree(s): OG0003267_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold27.16
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.60 tig00000144_g9051.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder
Cre01.g040000 30788495, RPL26 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder
Cz06g24050.t1 No alias Ribosomal protein L26/L24, eukaryotic/archaeal [Interproscan]. 0.07 OrthoFinder
Dusal.0160s00007.1 33188333 Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.04 OrthoFinder
EOD37550 No alias Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.02 OrthoFinder
OT_12G00940.1 No alias Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.07 OrthoFinder
PTI_04G00150.1 No alias Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.05 OrthoFinder
Sro694_g188520.1 Contig4437.g33305 60S ribosomal protein L26 0.08 OrthoFinder
TP05G04810.1 No alias Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.07 OrthoFinder
Vocar.0001s0799.1 32884988 KOW; Ribosomal protein L26/L24, eukaryotic/archaeal... 0.03 OrthoFinder
XM_002503926.1 MICPUN_91267, 91267 KOW; Ribosomal protein L26/L24, eukaryotic/archaeal... 0.07 OrthoFinder
XM_003055465.1 MicpuC2_30848, 30848 Ribosomal protein L26/L24, eukaryotic/archaeal; KOW... 0.02 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60014.1_6792 PRW60014 60S ribosomal L26-1 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496763.1_492 KAA8496763 60S ribosomal protein L26 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0015934 large ribosomal subunit IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
BP GO:0016255 attachment of GPI anchor to protein IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR005756 Ribosomal_L26/L24P_euk/arc 8 121
IPR005824 KOW 52 84
No external refs found!