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  5. SymbC1.scaffold2641.1

SymbC1.scaffold2641.1 (2641.1)


Aliases : 2641.1

Description : Mechanosensitive ion channel MscS [Interproscan].


Gene families : OG_01_0000544 (OrthoFinder) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2641.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
EOD39000 No alias Mechanosensitive ion channel MscS [Interproscan]. 0.02 OrthoFinder
Sro395_g134090.1 Contig4272.g32328 MscS family protein 0.01 OrthoFinder
SymbC1.scaffold11349.1 11349.1 Mechanosensitive ion channel MscS [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR006685 MscS_channel 343 538
No external refs found!