Aliases : 2632.2
Description : DNA ligase, ATP-dependent, C-terminal; DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, N-terminal [Interproscan].
Gene families : OG_01_0000772 (OrthoFinder) Phylogenetic Tree(s): OG0000772_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: SymbC1.scaffold2632.2 | |
Cluster | HCCA: Cluster_75 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cz01g42120.t1 | No alias | DNA ligase, ATP-dependent, C-terminal; DNA ligase,... | 0.02 | OrthoFinder | |
Sro1100_g241250.1 | Contig937.g9737 | DNA ligase 1 | 0.02 | OrthoFinder | |
Transcript_contig_55247 | 55247 | DNA ligase, ATP-dependent, N-terminal; DNA ligase,... | 0.01 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003910 | DNA ligase (ATP) activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006281 | DNA repair | IEA | Interproscan |
BP | GO:0006310 | DNA recombination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004486 | methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity | IEP | Enrichment |
MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Enrichment |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | Enrichment |
BP | GO:0015693 | magnesium ion transport | IEP | Enrichment |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Enrichment |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Enrichment |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | Enrichment |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
No external refs found! |