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  5. Cpa|evm.model.tig00020554.89

Cpa|evm.model.tig00020554.89 (tig00020554_g10867.t1)


Aliases : tig00020554_g10867.t1

Description : Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana


Gene families : OG_01_0000391 (OrthoFinder) Phylogenetic Tree(s): OG0000391_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020554.89
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Dusal.0201s00013.1 33186097 Ribonuclease II/R; Dis3-like cold-shock domain 2 [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498985.1_7938 KAA8498985 DIS3-like exonuclease 2 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006353 DNA-templated transcription, termination IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR001900 RNase_II/R 490 659
IPR041505 Dis3_CSD2 387 441
IPR033771 Rrp44_CSD1 298 337
No external refs found!