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  5. SymbC1.scaffold2619.1

SymbC1.scaffold2619.1 (2619.1)


Aliases : 2619.1

Description : BspA type Leucine rich repeat region; FNIP [Interproscan].


Gene families : OG_01_0004655 (OrthoFinder) Phylogenetic Tree(s): OG0004655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2619.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold5415.3 5415.3 Hypothetical protein 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR026906 LRR_5 480 581
IPR008615 FNIP 222 263
IPR008615 FNIP 389 431
IPR008615 FNIP 433 475
IPR008615 FNIP 185 219
IPR008615 FNIP 587 630
IPR008615 FNIP 287 321
IPR008615 FNIP 631 673
IPR008615 FNIP 323 365
No external refs found!