1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00020554.78

Cpa|evm.model.tig00020554.78 (tig00020554_g10858.t1)


Aliases : tig00020554_g10858.t1

Description : Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana


Gene families : OG_01_0000131 (OrthoFinder) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020554.78
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
EOD16388 No alias Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.01 OrthoFinder
EOD26114 No alias Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.01 OrthoFinder
OT_11G00020.1 No alias Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.03 OrthoFinder
PTI_01G04210.1 No alias Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.03 OrthoFinder
Transcript_contig_89527 89527 Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.03 OrthoFinder
XM_002509330.1 MICPUN_87287, 87287 Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.02 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20845.1_5008 PRW20845 Ubiquitin carboxyl-terminal hydrolase 3 isoform B 0.05 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0004357 glutamate-cysteine ligase activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 8 115
No external refs found!