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  5. SymbC1.scaffold2593.4

SymbC1.scaffold2593.4 (2593.4)


Aliases : 2593.4

Description : NOP5, N-terminal; Nop domain; Small GTPase superfamily, ARF/SAR type [Interproscan].


Gene families : OG_01_0003488 (OrthoFinder) Phylogenetic Tree(s): OG0003488_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2593.4
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Dusal.0189s00007.1 33201868 NOP5, N-terminal; Nop domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR012974 NOP5_N 4 67
IPR006689 Small_GTPase_ARF/SAR 328 442
IPR006689 Small_GTPase_ARF/SAR 244 304
IPR002687 Nop_dom 482 654
IPR002687 Nop_dom 171 284
No external refs found!