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  5. Cpa|evm.model.tig00020554.69

Cpa|evm.model.tig00020554.69 (tig00020554_g10849.t1)


Aliases : tig00020554_g10849.t1

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.REIL maturation factor


Gene families : OG_01_0002863 (OrthoFinder) Phylogenetic Tree(s): OG0002863_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020554.69
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Cz03g23060.t1 No alias ZN622/Rei1/Reh1, zinc finger C2H2-type [Interproscan]. 0.02 OrthoFinder
Sro762_g198750.1 Contig3620.g28016 Cytoplasmic 60S subunit biogenesis factor REI1 homolog 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0042255 ribosome assembly IEP Enrichment
BP GO:0042256 mature ribosome assembly IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 68 92
IPR041661 ZN622/Rei1/Reh1_Znf-C2H2 154 250
No external refs found!