SymbC1.scaffold257.12 (257.12)

Aliases : 257.12

Description : PDZ domain 6; Myosin head, motor domain; IQ motif, EF-hand binding site [Interproscan].

Gene families : OG_01_0000062 (OrthoFinder) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold257.12

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020553.108	tig00020553_g10595.t1	Myosin-7 OS=Arabidopsis thaliana	0.03	OrthoFinder
EOD18854	No alias	Myosin head, motor domain [Interproscan].	0.03	OrthoFinder
lcl\|BLLF01002511.1_cds_GFH24350.1_18827	HaLaN_22128, GFH24350	IQ motif, EF-hand binding site; Myosin head, motor...	0.02	OrthoFinder
lcl\|BLLF01002511.1_cds_GFH24351.1_18828	HaLaN_22129, GFH24351	Dilute domain [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	motor activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016459	myosin complex	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	Enrichment
BP	GO:0006793	phosphorus metabolic process	IEP	Enrichment
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Enrichment
BP	GO:0009187	cyclic nucleotide metabolic process	IEP	Enrichment
BP	GO:0009190	cyclic nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0050789	regulation of biological process	IEP	Enrichment
BP	GO:0050794	regulation of cellular process	IEP	Enrichment
BP	GO:0065007	biological regulation	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001609	Myosin_head_motor_dom	71	740
IPR041489	PDZ_6	1260	1305
IPR000048	IQ_motif_EF-hand-BS	850	869

External Links

No external refs found!