- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : tig00020554_g10843.t1
Description : 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic OS=Brassica napus
Gene families : OG_01_0001679 (OrthoFinder) Phylogenetic Tree(s): OG0001679_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00020554.62 | |
| Cluster | HCCA: Cluster_20 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Vocar.0012s0148.1 | 32894814 | Phospholipid/glycerol acyltransferase [Interproscan]. | 0.01 | OrthoFinder | |
| XM_003058104.1 | MicpuC2_4985, 4985 | Phospholipid/glycerol acyltransferase [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01002766.1_cds_GFH25257.1_19734 | HaLaN_23193, GFH25257 | PlsC domain-containing protein | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
| MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006400 | tRNA modification | IEP | Enrichment |
| BP | GO:0006457 | protein folding | IEP | Enrichment |
| BP | GO:0008033 | tRNA processing | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Enrichment |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Enrichment |
| MF | GO:0019842 | vitamin binding | IEP | Enrichment |
| CC | GO:0019867 | outer membrane | IEP | Enrichment |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | Enrichment |
| CC | GO:0031966 | mitochondrial membrane | IEP | Enrichment |
| CC | GO:0031968 | organelle outer membrane | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| MF | GO:0050661 | NADP binding | IEP | Enrichment |
| MF | GO:0051082 | unfolded protein binding | IEP | Enrichment |
| MF | GO:0070279 | vitamin B6 binding | IEP | Enrichment |
| MF | GO:0070402 | NADPH binding | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002123 | Plipid/glycerol_acylTrfase | 173 | 312 |
| No external refs found! |