Cpa|evm.model.tig00020554.58 (tig00020554_g10838.t1)


Aliases : tig00020554_g10838.t1

Description : VAMP-like protein YKT61 OS=Arabidopsis thaliana


Gene families : OG_01_0003170 (OrthoFinder) Phylogenetic Tree(s): OG0003170_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020554.58
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Cre17.g728150 30782150 Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder
Sro412_g137770.1 Contig2922.g23249 Synaptobrevin homolog YKT6 0.03 OrthoFinder
TP13G03390.1 No alias Longin domain; Synaptobrevin [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495625.1_1623 KAA8495625 VAMP-like protein YKT61 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Enrichment
BP GO:0003352 regulation of cilium movement IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005548 phospholipid transporter activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032879 regulation of localization IEP Enrichment
BP GO:0032886 regulation of microtubule-based process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
BP GO:0051270 regulation of cellular component movement IEP Enrichment
BP GO:0060632 regulation of microtubule-based movement IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR010908 Longin_dom 55 108
No external refs found!