- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : 252.18
Description : Carotenoid oxygenase [Interproscan].
Gene families : OG_01_0000773 (OrthoFinder) Phylogenetic Tree(s): OG0000773_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: SymbC1.scaffold252.18 | |
| Cluster | HCCA: Cluster_58 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| OT_01G04510.1 | No alias | Carotenoid oxygenase [Interproscan]. | 0.01 | OrthoFinder | |
| XM_003056029.1 | MicpuC2_49450, 49450 | Carotenoid oxygenase [Interproscan]. | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEA | Interproscan |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004418 | hydroxymethylbilane synthase activity | IEP | Enrichment |
| MF | GO:0005230 | extracellular ligand-gated ion channel activity | IEP | Enrichment |
| BP | GO:0006486 | protein glycosylation | IEP | Enrichment |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Enrichment |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Enrichment |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Enrichment |
| MF | GO:0016758 | hexosyltransferase activity | IEP | Enrichment |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Enrichment |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Enrichment |
| MF | GO:0022836 | gated channel activity | IEP | Enrichment |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Enrichment |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Enrichment |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Enrichment |
| BP | GO:0070085 | glycosylation | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004294 | Carotenoid_Oase | 2 | 453 |
| No external refs found! |