SymbC1.scaffold2518.1 (2518.1)

Aliases : 2518.1

Description : K Homology domain, type 1 [Interproscan].

Gene families : OG_01_0000189 (OrthoFinder) Phylogenetic Tree(s): OG0000189_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold2518.1

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cz04g06050.t1	No alias	K Homology domain, type 1; WW domain [Interproscan].	0.02	OrthoFinder
EOD09616	No alias	K Homology domain, type 1 [Interproscan].	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0002949	tRNA threonylcarbamoyladenosine modification	IEP	Enrichment
MF	GO:0003690	double-stranded DNA binding	IEP	Enrichment
BP	GO:0006400	tRNA modification	IEP	Enrichment
BP	GO:0008033	tRNA processing	IEP	Enrichment
BP	GO:0034470	ncRNA processing	IEP	Enrichment
BP	GO:0070525	tRNA threonylcarbamoyladenosine metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004088	KH_dom_type_1	13	74
IPR004088	KH_dom_type_1	429	490
IPR004088	KH_dom_type_1	91	149
IPR004088	KH_dom_type_1	234	296
IPR004088	KH_dom_type_1	316	378
IPR004088	KH_dom_type_1	509	569

External Links

No external refs found!