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  5. SymbC1.scaffold2516.2

SymbC1.scaffold2516.2 (2516.2)


Aliases : 2516.2

Description : FAD/NAD(P)-binding domain; 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal [Interproscan].


Gene families : OG_01_0000195 (OrthoFinder) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2516.2
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
TP11G02440.1 No alias FAD/NAD(P)-binding domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_53821 53821 FAD/NAD(P)-binding domain [Interproscan]. 0.01 OrthoFinder
Vocar.0008s0223.1 32897415 FAD/NAD(P)-binding domain [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496574.1_303 KAA8496574 External alternative NAD(P)H-ubiquinone oxidoreductase... 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR001104 3-oxo-5_a-steroid_4-DH_C 626 772
IPR023753 FAD/NAD-binding_dom 25 348
No external refs found!