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  5. SymbC1.scaffold2515.3

SymbC1.scaffold2515.3 (2515.3)


Aliases : 2515.3

Description : FAD/NAD(P)-binding domain; BFD-like [2Fe-2S]-binding domain; Nitrite/Sulfite reductase ferredoxin-like domain [Interproscan].


Gene families : OG_01_0006543 (OrthoFinder) Phylogenetic Tree(s): OG0006543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2515.3
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
PTI_10G01270.1 No alias Nitrite/sulphite reductase 4Fe-4S domain; BFD-like... 0.01 OrthoFinder
Sro256_g100530.1 Contig3587.g27698 Nitrite reductase [NAD(P)H] large subunit 0.01 OrthoFinder
TP02G01170.1 No alias FAD/NAD(P)-binding domain; Nitrite/sulphite reductase... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR007419 BFD-like_2Fe2S-bd_dom 248 292
IPR005117 NiRdtase/SiRdtase_haem-b_fer 321 382
IPR023753 FAD/NAD-binding_dom 2 101
No external refs found!