Cpa|evm.model.tig00020554.32 (tig00020554_g10817.t1)


Aliases : tig00020554_g10817.t1

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF1A PIC assembly factor


Gene families : OG_01_0004024 (OrthoFinder) Phylogenetic Tree(s): OG0004024_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020554.32
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
EOD09064 No alias RNA-binding domain, S1, IF1 type [Interproscan]. 0.02 OrthoFinder
OT_13G01620.1 No alias RNA-binding domain, S1, IF1 type [Interproscan]. 0.02 OrthoFinder
PTI_01G03750.1 No alias RNA-binding domain, S1, IF1 type [Interproscan]. 0.04 OrthoFinder
Sro1192_g251030.1 Contig331.g4399 Eukaryotic translation initiation factor 1A 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR006196 RNA-binding_domain_S1_IF1 31 92
No external refs found!