SymbC1.scaffold2496.8 (2496.8)

Aliases : 2496.8

Description : Elongation factor EFG, domain V-like; Translation elongation factor EFG/EF2, domain IV; Transcription factor, GTP-binding domain; Elongation Factor G, domain II [Interproscan].

Gene families : OG_01_0000224 (OrthoFinder) Phylogenetic Tree(s): OG0000224_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold2496.8
Cluster	HCCA: Cluster_126

Target	Alias	Description	ECC score	Gene Family Method
Cz04g12070.t1	No alias	Translation elongation factor EFTu-like, domain 2;...	0.02	OrthoFinder
Dusal.0938s00002.1	33192805	Transcription factor, GTP-binding domain [Interproscan].	0.02	OrthoFinder
OT_07G00360.1	No alias	Translation elongation factor EFTu-like, domain 2;...	0.02	OrthoFinder
Transcript_contig_90013	90013	Translation elongation factor EFTu-like, domain 2;...	0.01	OrthoFinder
lcl\|BLLF01006069.1_cds_GFH31923.1_26400	HaLaN_31054, GFH31923	Elongation factor	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006468	protein phosphorylation	IEP	Enrichment
CC	GO:0009521	photosystem	IEP	Enrichment
CC	GO:0009522	photosystem I	IEP	Enrichment
CC	GO:0009538	photosystem I reaction center	IEP	Enrichment
MF	GO:0010181	FMN binding	IEP	Enrichment
BP	GO:0015979	photosynthesis	IEP	Enrichment
MF	GO:0016301	kinase activity	IEP	Enrichment
BP	GO:0016310	phosphorylation	IEP	Enrichment
MF	GO:0046912	acyltransferase, acyl groups converted into alkyl on transfer	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005517	Transl_elong_EFG/EF2_IV	499	614
IPR041095	EFG_II	380	443
IPR000640	EFG_V-like	659	737
IPR000795	T_Tr_GTP-bd_dom	18	146

External Links

No external refs found!

SymbC1.scaffold2496.8 (2496.8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation