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  5. Cpa|evm.model.tig00020554.20

Cpa|evm.model.tig00020554.20 (tig00020554_g10806.t1)


Aliases : tig00020554_g10806.t1

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP14 assembly factor


Gene families : OG_01_0001582 (OrthoFinder) Phylogenetic Tree(s): OG0001582_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020554.20
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Cre11.g478950 30775827 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder
Cz02g05190.t1 No alias Utp14 protein [Interproscan]. 0.01 OrthoFinder
EOD14154 No alias Utp14 protein [Interproscan]. 0.04 OrthoFinder
EOD34678 No alias Utp14 protein [Interproscan]. 0.01 OrthoFinder
OT_04G00780.1 No alias Utp14 protein [Interproscan]. 0.04 OrthoFinder
PTI_28G00410.1 No alias Utp14 protein [Interproscan]. 0.03 OrthoFinder
Sro54_g031940.1 Contig2430.g19882 Associated protein 14 homolog A 0.03 OrthoFinder
TP02G07320.1 No alias Utp14 protein [Interproscan]. 0.03 OrthoFinder
Vocar.0027s0003.1 32887208 Utp14 protein [Interproscan]. 0.02 OrthoFinder
XM_002504361.1 MICPUN_102467, 102467 Utp14 protein [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01005829.1_cds_GFH31682.1_26159 HaLaN_30771, GFH31682 U3 small nucleolar RNA-associated 14-like protein A 0.05 OrthoFinder
lcl|BLLF01005829.1_cds_GFH31683.1_26160 HaLaN_30772, GFH31683 Utp14 protein [Interproscan]. 0.04 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50835.1_983 PRW50835 U3 small nucleolar RNA-associated 14-like protein A 0.04 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496059.1_2057 KAA8496059 U3 small nucleolar RNA-associated protein 14-like A 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!