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  5. SymbC1.scaffold2456.4

SymbC1.scaffold2456.4 (2456.4)


Aliases : 2456.4

Description : Pentatricopeptide repeat [Interproscan].


Gene families : OG_01_0008890 (OrthoFinder) Phylogenetic Tree(s): OG0008890_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2456.4
Cluster HCCA: Cluster_6


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 297 347
IPR002885 Pentatricopeptide_repeat 201 222
IPR002885 Pentatricopeptide_repeat 234 264
IPR002885 Pentatricopeptide_repeat 490 519
IPR002885 Pentatricopeptide_repeat 378 405
IPR002885 Pentatricopeptide_repeat 412 438
IPR002885 Pentatricopeptide_repeat 52 80
No external refs found!