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  5. SymbC1.scaffold245.21

SymbC1.scaffold245.21 (245.21)


Aliases : 245.21

Description : Hypothetical protein


Gene families : OG_01_0002828 (OrthoFinder) Phylogenetic Tree(s): OG0002828_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold245.21
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021463.4 tig00021463_g21613.t1 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.01 OrthoFinder
Cre14.g611150 30776765 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003972 RNA ligase (ATP) activity IEP Enrichment
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment

No InterPro domains available for this sequence

No external refs found!