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  5. SymbC1.scaffold2443.4

SymbC1.scaffold2443.4 (2443.4)


Aliases : 2443.4

Description : Cold-shock protein, DNA-binding [Interproscan].


Gene families : OG_01_0005518 (OrthoFinder) Phylogenetic Tree(s): OG0005518_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2443.4
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold534.6 534.6 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
InterPro domains Description Start Stop
IPR002059 CSP_DNA-bd 1107 1169
IPR002059 CSP_DNA-bd 1193 1256
No external refs found!