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  5. SymbC1.scaffold24401.1

SymbC1.scaffold24401.1 (24401.1)


Aliases : 24401.1

Description : Ribosomal protein S13 [Interproscan].


Gene families : OG_01_0002223 (OrthoFinder) Phylogenetic Tree(s): OG0002223_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold24401.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cre06.g272950 30778811, RPS18 Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 OrthoFinder
Cz03g21050.t1 No alias Ribosomal protein S13 [Interproscan]. 0.03 OrthoFinder
EOD07550 No alias Ribosomal protein S13 [Interproscan]. 0.06 OrthoFinder
EOD24485 No alias Ribosomal protein S13 [Interproscan]. 0.06 OrthoFinder
OT_14G03080.1 No alias Ribosomal protein S13 [Interproscan]. 0.02 OrthoFinder
PTI_23G01020.1 No alias Ribosomal protein S13 [Interproscan]. 0.05 OrthoFinder
Sro2117_g315240.1 Contig3258.g25694 40S ribosomal protein S18 0.06 OrthoFinder
TP02G00280.1 No alias Ribosomal protein S13 [Interproscan]. 0.06 OrthoFinder
Vocar.0002s0337.1 32891179 Ribosomal protein S13 [Interproscan]. 0.02 OrthoFinder
XM_002505702.1 MICPUN_109369, 109369 Ribosomal protein S18 (RPS18) 0.03 OrthoFinder
XM_003063744.1 MicpuC2_49747, 49747 Ribosomal protein S18 (RPS18) 0.04 OrthoFinder
lcl|BLLF01002860.1_cds_GFH25599.1_20076 HaLaN_23587, GFH25599 Ribosomal protein S18 0.01 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56629.1_9755 PRW56629 40S ribosomal S18 0.03 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495014.1_3544 KAA8495014 40S ribosomal protein S18 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 30 157
IPR001892 Ribosomal_S13 1 28
No external refs found!