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  5. Cpa|evm.model.tig00020554.140

Cpa|evm.model.tig00020554.140 (tig00020554_g10919.t1)


Aliases : tig00020554_g10919.t1

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL32 component


Gene families : OG_01_0003368 (OrthoFinder) Phylogenetic Tree(s): OG0003368_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020554.140
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre06.g289550 30780114, RPL32 Protein biosynthesis.cytosolic ribosome.large subunit... 0.36 OrthoFinder
Cz11g16180.t1 No alias Ribosomal protein L32e [Interproscan]. 0.22 OrthoFinder
Dusal.0931s00005.1 33189912 Ribosomal protein L32e [Interproscan]. 0.22 OrthoFinder
EOD35360 No alias Ribosomal protein L32e [Interproscan]. 0.19 OrthoFinder
EOD35362 No alias Ribosomal protein L32e [Interproscan]. 0.19 OrthoFinder
OT_04G01320.1 No alias Ribosomal protein L32e [Interproscan]. 0.2 OrthoFinder
PTI_13G03600.1 No alias Ribosomal protein L32e [Interproscan]. 0.29 OrthoFinder
Sro182_g079470.1 Contig1301.g12083 60S ribosomal protein L32 0.43 OrthoFinder
SymbC1.scaffold5627.3 5627.3 Ribosomal protein L32e [Interproscan]. 0.08 OrthoFinder
TP12G00110.1 No alias Ribosomal protein L32e [Interproscan]. 0.37 OrthoFinder
Vocar.0001s1497.1 32884164 Ribosomal protein L32e [Interproscan]. 0.2 OrthoFinder
XM_002508155.1 MICPUN_91456, 91456 Ribosomal protein L32e [Interproscan]. 0.34 OrthoFinder
XM_003057642.1 MicpuC2_49537, 49537 Ribosomal protein L32e [Interproscan]. 0.12 OrthoFinder
lcl|BLLF01000296.1_cds_GFH10216.1_4693 HaLaN_05489, GFH10216 Ribosomal protein L32e [Interproscan]. 0.16 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44541.1_2370 PRW44541 60S ribosomal L32-1 0.19 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494591.1_3121 KAA8494591 60S ribosomal protein L32 0.14 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001515 Ribosomal_L32e 26 132
No external refs found!