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  5. SymbC1.scaffold2372.3

SymbC1.scaffold2372.3 (2372.3)


Aliases : 2372.3

Description : EF-hand domain [Interproscan].


Gene families : OG_01_0000037 (OrthoFinder) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2372.3
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cre03.g178150 30788235, CAM1 Calmodulin OS=Chlamydomonas reinhardtii 0.02 OrthoFinder
SymbC1.scaffold958.2 958.2 EF-hand domain [Interproscan]. 0.04 OrthoFinder
TP07G01960.1 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000108.1_cds_GFH07656.1_2133 HaLaN_02487, GFH07656 Centrin 0.01 OrthoFinder
lcl|BLLF01001080.1_cds_GFH16987.1_11464 HaLaN_13517, GFH16987 EF-hand domain pair [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002489.1_cds_GFH24275.1_18752 HaLaN_22038, GFH24275 EF-hand domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 26 86
IPR002048 EF_hand_dom 99 159
No external refs found!