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  5. SymbC1.scaffold236.11

SymbC1.scaffold236.11 (236.11)


Aliases : 236.11

Description : Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain; Aconitase A/isopropylmalate dehydratase small subunit, swivel domain; DNA/RNA-binding protein Alba-like [Interproscan].


Gene families : OG_01_0001627 (OrthoFinder) Phylogenetic Tree(s): OG0001627_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold236.11
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
EOD33985 No alias 3-isopropylmalate dehydratase [Ensembl]. 0.02 OrthoFinder
Sro627_g177940.1 Contig3366.g26381 3-isopropylmalate dehydratase large subunit (Fragment) 0.01 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492425.1_9118 KAA8492425 3-isopropylmalate dehydratase large subunit, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004743 pyruvate kinase activity IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 583 653
IPR001030 Acoase/IPM_deHydtase_lsu_aba 19 317
IPR000573 AconitaseA/IPMdHydase_ssu_swvl 382 495
No external refs found!