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Aliases : 23491.1
Description : Prokaryotic N-terminal methylation site; Type II secretion system protein GspF domain; Type II secretion system protein GspG, C-terminal [Interproscan].
Gene families : OG_01_0000353 (OrthoFinder) Phylogenetic Tree(s): OG0000353_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: SymbC1.scaffold23491.1 | |
| Cluster | HCCA: Cluster_159 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SymbC1.scaffold2.1699 | 2.1699 | Type II secretion system protein GspF domain [Interproscan]. | 0.02 | OrthoFinder | |
| SymbC1.scaffold20710.1 | 20710.1 | Type II/IV secretion system protein; Type II secretion... | 0.04 | OrthoFinder | |
| SymbC1.scaffold39805.1 | 39805.1 | Type II/IV secretion system protein; Type II secretion... | 0.03 | OrthoFinder | |
| SymbC1.scaffold4.276 | 4.276 | Helix-turn-helix, HxlR type; NIPSNAP; GNAT domain;... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| MF | GO:0004743 | pyruvate kinase activity | IEP | Enrichment |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | Enrichment |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | Enrichment |
| BP | GO:0006605 | protein targeting | IEP | Enrichment |
| BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
| MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
| MF | GO:0030955 | potassium ion binding | IEP | Enrichment |
| MF | GO:0031420 | alkali metal ion binding | IEP | Enrichment |
| BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
| BP | GO:0034613 | cellular protein localization | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| BP | GO:0045047 | protein targeting to ER | IEP | Enrichment |
| CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
| BP | GO:0051668 | localization within membrane | IEP | Enrichment |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Enrichment |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
| No external refs found! |