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  5. SymbC1.scaffold23268.1

SymbC1.scaffold23268.1 (23268.1)


Aliases : 23268.1

Description : Tetratricopeptide repeat 2 [Interproscan].


Gene families : OG_01_0000105 (OrthoFinder) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold23268.1
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01003214.1_cds_GFH26713.1_21190 HaLaN_24907, GFH26713 Protein STIP1 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497788.1_6741 KAA8497788 Small glutamine-rich tetratricopeptide repeat-containing... 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8500085.1_9038 KAA8500085 Hsp70-Hsp90 organizing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004357 glutamate-cysteine ligase activity IEP Enrichment
MF GO:0004363 glutathione synthase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006750 glutathione biosynthetic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013105 TPR_2 81 112
No external refs found!