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  5. SymbC1.scaffold22459.1

SymbC1.scaffold22459.1 (22459.1)


Aliases : 22459.1

Description : Thioredoxin-like; Pyrrolo-quinoline quinone repeat; Pyrrolo-quinoline quinone-like domain [Interproscan].


Gene families : OG_01_0001092 (OrthoFinder) Phylogenetic Tree(s): OG0001092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold22459.1
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold20929.1 20929.1 Pyrrolo-quinoline quinone repeat; Pyrrolo-quinoline... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001539 cilium or flagellum-dependent cell motility IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0004803 transposase activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006313 transposition, DNA-mediated IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
CC GO:0009428 bacterial-type flagellum basal body, distal rod, P ring IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0032196 transposition IEP Enrichment
BP GO:0040011 locomotion IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
BP GO:0048870 cell motility IEP Enrichment
BP GO:0071973 bacterial-type flagellum-dependent cell motility IEP Enrichment
BP GO:0097588 archaeal or bacterial-type flagellum-dependent cell motility IEP Enrichment
InterPro domains Description Start Stop
IPR025666 PQQ-like_dom 257 281
IPR002372 PQQ_repeat 298 412
IPR002372 PQQ_repeat 441 515
No external refs found!