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  5. SymbC1.scaffold2241.2

SymbC1.scaffold2241.2 (2241.2)


Aliases : 2241.2

Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000460 (OrthoFinder) Phylogenetic Tree(s): OG0000460_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2241.2
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1368.1 1368.1 Hypothetical protein 0.06 OrthoFinder
SymbC1.scaffold15904.1 15904.1 Hypothetical protein 0.06 OrthoFinder
SymbC1.scaffold165.11 165.11 Reverse transcriptase, RNA-dependent DNA polymerase... 0.01 OrthoFinder
SymbC1.scaffold1681.1 1681.1 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold3870.5 3870.5 Hypothetical protein 0.09 OrthoFinder
SymbC1.scaffold473.5 473.5 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold5347.3 5347.3 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold8060.3 8060.3 Hypothetical protein 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 365 483
No external refs found!