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  5. SymbC1.scaffold2225.4

SymbC1.scaffold2225.4 (2225.4)


Aliases : 2225.4

Description : LSM domain, eukaryotic/archaea-type; Methyltransferase domain 25 [Interproscan].


Gene families : OG_01_0000999 (OrthoFinder) Phylogenetic Tree(s): OG0000999_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2225.4
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
EOD10683 No alias LSM domain, eukaryotic/archaea-type [Interproscan]. 0.01 OrthoFinder
EOD22517 No alias LSM domain, eukaryotic/archaea-type [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
InterPro domains Description Start Stop
IPR041698 Methyltransf_25 74 170
IPR001163 LSM_dom_euk/arc 335 398
No external refs found!