1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold2215.5

SymbC1.scaffold2215.5 (2215.5)


Aliases : 2215.5

Description : DEAD/DEAH box helicase domain; Helicase, C-terminal; Amino acid transporter, transmembrane domain [Interproscan].


Gene families : OG_01_0003773 (OrthoFinder) Phylogenetic Tree(s): OG0003773_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2215.5

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020902.78 tig00020902_g15033.t1 Solute transport.carrier-mediated transport.IT... 0.03 OrthoFinder
PTI_12G03900.1 No alias Citrate transporter-like domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 964 1065
IPR013057 AA_transpt_TM 298 589
IPR011545 DEAD/DEAH_box_helicase_dom 716 894
No external refs found!