SymbC1.scaffold220.23 (220.23)

Aliases : 220.23

Description : ABC transporter-like; ABC-transporter extension domain [Interproscan].

Gene families : OG_01_0001466 (OrthoFinder) Phylogenetic Tree(s): OG0001466_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold220.23
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
Cre06.g271850	30779626	ABC transporter F family member 5 OS=Arabidopsis thaliana	0.02	OrthoFinder
Sro221_g091090.1	Contig91.g1032	Probable ATP-binding cassette sub-family F member 3 homolog	0.01	OrthoFinder
XM_002502948.1	MICPUN_97601, 97601	ATP-binding cassette superfamily	0.03	OrthoFinder
XM_003058115.1	MicpuC2_33033, 33033	ATP-binding cassette superfamily	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0004371	glycerone kinase activity	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
CC	GO:0005634	nucleus	IEP	Enrichment
BP	GO:0006066	alcohol metabolic process	IEP	Enrichment
BP	GO:0006071	glycerol metabolic process	IEP	Enrichment
MF	GO:0016301	kinase activity	IEP	Enrichment
MF	GO:0016743	carboxyl- or carbamoyltransferase activity	IEP	Enrichment
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
BP	GO:0019400	alditol metabolic process	IEP	Enrichment
BP	GO:0019751	polyol metabolic process	IEP	Enrichment
MF	GO:0030151	molybdenum ion binding	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR032781	ABC_tran_Xtn	297	367
IPR003439	ABC_transporter-like_ATP-bd	80	253
IPR003439	ABC_transporter-like_ATP-bd	458	590

External Links

No external refs found!