SymbC1.scaffold22.99 (22.99)

Aliases : 22.99

Description : SoxA, A3 domain; Sarcosine oxidase, gamma subunit; LysR, substrate-binding; Aminomethyltransferase, folate-binding domain; Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA; Transcription regulator HTH, LysR; Glycine cleavage T-protein, C-terminal barrel domain; 2Fe-2S iron-sulfur cluster binding domain; FAD/NAD(P)-binding domain; DNA-binding HTH domain, TetR-type; FAD dependent oxidoreductase [Interproscan].

Gene families : OG_01_0007293 (OrthoFinder) Phylogenetic Tree(s): OG0007293_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold22.99
Cluster	HCCA: Cluster_100

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008484	sulfuric ester hydrolase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013977	GCV_T_C	3071	3146
IPR007375	SoxG	3195	3330
IPR006222	GCV_T_N	2780	3044
IPR000847	Tscrpt_reg_HTH_LysR	1362	1420
IPR005119	LysR_subst-bd	1447	1648
IPR008274	AldOxase/xan_DH_Mopterin-bd	303	574
IPR008274	AldOxase/xan_DH_Mopterin-bd	589	669
IPR008274	AldOxase/xan_DH_Mopterin-bd	37	170
IPR023753	FAD/NAD-binding_dom	2335	2596
IPR041117	SoxA_A3	2682	2765
IPR001670	ADH_Fe/GldA	957	1291
IPR006076	FAD-dep_OxRdtase	1717	2064
IPR001647	HTH_TetR	3798	3835

External Links

No external refs found!

SymbC1.scaffold22.99 (22.99)

Expression Profile

Co-expression Networks

Functional Annotation