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  5. Cpa|evm.model.tig00020553.263

Cpa|evm.model.tig00020553.263 (tig00020553_g10749.t1)


Aliases : tig00020553_g10749.t1

Description : Probable histidine kinase 4 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020553.263
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020660.25 tig00021501_g21945.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.03 OrthoFinder
Transcript_contig_89432 89432 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.02 OrthoFinder
lcl|BLLF01000788.1_cds_GFH14961.1_9438 HaLaN_11105, GFH14961 Signal transduction histidine kinase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003661 HisK_dim/P 106 168
IPR001789 Sig_transdc_resp-reg_receiver 422 545
No external refs found!