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  5. SymbC1.scaffold22.109

SymbC1.scaffold22.109 (22.109)


Aliases : 22.109

Description : Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Dihydroorotate dehydrogenase domain; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; 4Fe-4S ferredoxin-type, iron-sulphur binding domain; Pyruvate:ferredoxin oxidoreductase, core domain II; Pyruvate-flavodoxin oxidoreductase, EKR domain [Interproscan].


Gene families : OG_01_0002672 (OrthoFinder) Phylogenetic Tree(s): OG0002672_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold22.109
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_59637 59637 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA Interproscan
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEA Interproscan
MF GO:0030976 thiamine pyrophosphate binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR033412 PFOR_II 234 325
IPR011766 TPP_enzyme-bd_C 928 1039
IPR005720 Dihydroorotate_DH 1158 1445
IPR019752 Pyrv/ketoisovalerate_OxRed_cat 392 575
IPR017896 4Fe4S_Fe-S-bd 656 724
IPR019456 Pyrv-flavodox_OxRtase_EKR 603 645
IPR002880 Pyrv_Fd/Flavodoxin_OxRdtase_N 1 212
No external refs found!