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  5. SymbC1.scaffold2133.2

SymbC1.scaffold2133.2 (2133.2)


Aliases : 2133.2

Description : EF-hand domain pair [Interproscan].


Gene families : OG_01_0000037 (OrthoFinder) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2133.2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021070.12 tig00021070_g17821.t1 Calmodulin OS=Chlamydomonas reinhardtii 0.01 OrthoFinder
Cz04g38280.t1 No alias EF-hand domain [Interproscan]. 0.03 OrthoFinder
Cz14g12250.t1 No alias EF-hand domain pair; EF-hand domain [Interproscan]. 0.01 OrthoFinder
Dusal.0665s00004.1 33203208 EF-hand domain pair [Interproscan]. 0.02 OrthoFinder
EOD14806 No alias EF-hand domain [Interproscan]. 0.01 OrthoFinder
EOD24486 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
OT_01G03940.1 No alias EF-hand domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold1032.3 1032.3 EF-hand domain; EF-hand domain pair [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold1585.6 1585.6 EF-hand domain [Interproscan]. 0.02 OrthoFinder
TP07G01960.1 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
Vocar.0001s1425.1 32885528 EF-hand domain [Interproscan]. 0.02 OrthoFinder
Vocar.0015s0348.1 32899204 EF-hand domain [Interproscan]. 0.01 OrthoFinder
Vocar.0015s0353.1 32898853 EF-hand domain [Interproscan]. 0.01 OrthoFinder
Vocar.0019s0206.1 32892735 EF-hand domain [Interproscan]. 0.01 OrthoFinder
XM_002505526.1 MICPUN_77142, 77142 EF-hand domain [Interproscan]. 0.01 OrthoFinder
XM_003055480.1 MicpuC2_11510, 11510 EF-hand domain [Interproscan]. 0.01 OrthoFinder
XM_003056806.1 MicpuC2_49514, 49514 Caltractin 0.01 OrthoFinder
lcl|BLLF01002489.1_cds_GFH24275.1_18752 HaLaN_22038, GFH24275 EF-hand domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!