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  5. Cpa|evm.model.tig00000114.47

Cpa|evm.model.tig00000114.47 (tig00000114_g6052.t1)


Aliases : tig00000114_g6052.t1

Description : GTP-binding protein At2g22870 OS=Arabidopsis thaliana


Gene families : OG_01_0000265 (OrthoFinder) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000114.47
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Cre12.g524950 30793039 GTP-binding protein At2g22870 OS=Arabidopsis thaliana 0.01 OrthoFinder
Dusal.0048s00043.1 33189485 GTP binding domain [Interproscan]. 0.02 OrthoFinder
Dusal.0358s00010.1 33203378 Mitochondrial substrate/solute carrier [Interproscan]. 0.01 OrthoFinder
Dusal.0614s00006.1 33202084 GTP binding domain [Interproscan]. 0.02 OrthoFinder
OT_01G03560.1 No alias Mitochondrial substrate/solute carrier [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58204.1_7581 PRW58204 GTP-binding protein 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497176.1_905 KAA8497176 Putative GTP-binding protein EngB 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006665 sphingolipid metabolic process IEP Enrichment
BP GO:0006672 ceramide metabolic process IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 274 382
No external refs found!