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  5. SymbC1.scaffold2114.3

SymbC1.scaffold2114.3 (2114.3)


Aliases : 2114.3

Description : SET domain; Domain of unknown function DUF1995; Rubisco LSMT, substrate-binding domain [Interproscan].


Gene families : OG_01_0004654 (OrthoFinder) Phylogenetic Tree(s): OG0004654_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2114.3
Cluster HCCA: Cluster_13


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
InterPro domains Description Start Stop
IPR018962 DUF1995 1040 1285
IPR015353 Rubisco_LSMT_subst-bd 798 948
IPR001214 SET_dom 533 728
No external refs found!