1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold2051.2

SymbC1.scaffold2051.2 (2051.2)


Aliases : 2051.2

Description : Ankyrin repeat-containing domain [Interproscan].


Gene families : OG_01_0000766 (OrthoFinder) Phylogenetic Tree(s): OG0000766_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2051.2
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Cre16.g674300 30777930, FAP269 Protein translocation.chloroplast.outer envelope... 0.01 OrthoFinder
Cre17.g702200 30782338, ANK29 Protein translocation.chloroplast.outer envelope... 0.01 OrthoFinder
Cz12g11010.t1 No alias Ankyrin repeat-containing domain; STI1 domain [Interproscan]. 0.01 OrthoFinder
OT_01G06280.1 No alias Ankyrin repeats (many copies); STI1 domain [Interproscan]. 0.01 OrthoFinder
OT_13G00340.1 No alias Ankyrin repeat-containing domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_59002 59002 Ankyrin repeat-containing domain; STI1 domain [Interproscan]. 0.02 OrthoFinder
Vocar.0004s0215.1 32889521 Ankyrin repeats (many copies); Ankyrin repeat; STI1... 0.01 OrthoFinder
Vocar.0018s0016.1 32898749 Ankyrin repeat-containing domain; STI1 domain [Interproscan]. 0.01 OrthoFinder
XM_002508338.1 MICPUN_113331, 113331 STI1 domain; Ankyrin repeat-containing domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004451 isocitrate lyase activity IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 144 234
No external refs found!