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  5. SymbC1.scaffold20.250

SymbC1.scaffold20.250 (20.250)


Aliases : 20.250

Description : RND efflux pump, membrane fusion protein, barrel-sandwich domain [Interproscan].


Gene families : OG_01_0011560 (OrthoFinder) Phylogenetic Tree(s): OG0011560_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold20.250
Cluster HCCA: Cluster_17


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR032317 HlyD_D23 837 1037
No external refs found!